soap3 dp to run in linux online online with Winfy

We have hosted the application soap3 dp to run in linux online in order to run this application in our online workstations with Wine or directly.

Quick description about soap3 dp to run in linux online:

Latest Code on GitHub:
https: //github.com/aquaskyline/SOAP3-dp

SOAP3-dp, through leveraging the computational power of both CPU and GPU with optimized algorithms, delivers high speed and sensitivity simultaneously. Compared with widely adopted aligners including BWA, Bowtie2, SeqAlto, CUSHAW2, GEM and GPU-based aligners BarraCUDA and CUSHAW, SOAP3-dp was found to be two to tens of times faster, while maintaining the highest sensitivity and lowest false discovery rate (FDR) on Illumina reads with different lengths. SOAP3-dp natively supports BAM file format and provides the same scoring scheme as BWA, which enables it to be integrated into existing analysis pipelines.

Citation: Luo R, Wong T, Zhu J, Liu C-M, Zhu X, et al. (2013) SOAP3-dp: Fast, Accurate and Sensitive GPU-Based Short Read Aligner. PLoS ONE 8(5): e65632. doi: 10.1371/journal.pone.0065632

Audience: Science/Research.
User interface: Console/Terminal.
Programming Language: C++, C.

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