We have hosted the application rafts3 to run in windows online over linux online in order to run this application in our online workstations with Wine or directly.
Quick description about rafts3 to run in windows online over linux online:
RAFTS3 can perform high-speed protein search comparisons locally using a desktop computer or laptop. RAFTS3 performed searches many times faster than those with BLASTp against large protein databases such as NR and Pfam, with a small loss of sensitivity depending on the similaritydegree of the sequences. RAFTS3 is a new alternative for fast comparison of protein sequences, genome annotation and biological data mining.
Preprint: http: //dx.doi.org/10.1101/055269
Precomputed databases evaluated on paper are available for download at http: //www.bioinfo.ufpr.br/software/rafts3
Features:
- Sequence Comparison
- Alignment-Free
Audience: Science/Research.
User interface: Command-line.
Programming Language: MATLAB.
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