qsdpr to run in linux online online with Winfy

We have hosted the application qsdpr to run in linux online in order to run this application in our online workstations with Wine or directly.

Quick description about qsdpr to run in linux online:

This is a viral quasispecies reconstruction software for quasispecies assembly problem on mRNA viruses, which is based on a correlation clustering approach and uses semidefinite optimization framework. The software accepts a reference genome, a NGS read set aligned to this reference and set of SNP locations in the form of a vcf file and outputs an optimal set of reconstructed species genomes which describes the underlying viral population.

Features:

• Quasispecies
• mRNA virus
• Clustering
• Semidefinite program
• HIV-1 virus

Audience: Science/Research.

Programming Language: Unix Shell, Python, C.

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