ppixpress

We have hosted the application ppixpress in order to run this application in our online workstations with Wine or directly.

Quick description about ppixpress:

Although protein-protein interaction networks are an ubiquitous component of modern systems biology, comparatively few efforts have been made to tailor their topology to the actual cellular condition under study. Since a simple reduction of the networks to the subset of expressed genes only scratches the surface of higher organisms� regulatory capabilities, we propose the advanced method PPIXpress that allows to exploit expression data at the transcript-level and is thus able to also reveal alterations in protein connectivity caused by alternative splicing.
The original publication can be found on https: //bioinformatics.oxfordjournals.org/content/32/4/571 .

Features:

• automatic construction of protein-protein interaction networks

Audience: Healthcare Industry, Science/Research.
User interface: Java Swing, Console/Terminal, Command-line.
Programming Language: Java.
Categories: