msp htprimer online with Winfy

We have hosted the application msp htprimer in order to run this application in our online workstations with Wine or directly.

Quick description about msp htprimer:

MSP-HTPrimer is an open source, web-based high-throughput and genome-wide primer design pipeline for bisulfite-based assays (MSP, BSP and COBRA) and MSRE-PCR assay and capable of simultaneously processing hundreds to thousands of target sequences. MSP-HTPrimer takes genome-wide annotations of SNPs and repeats into consideration to design primer pairs for higher success rate. MSP-HTPrimer enables hierarchical filtering and visualisation of designed primers in UCSC genome browser for efficient selection of assays.

Features:

• BSP
• MSP
• DNA methylation
• BSP-COBRA
• MSRE

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