icn3d

We have hosted the application icn3d in order to run this application in our online workstations with Wine or directly.

Quick description about icn3d:

"I see in 3D" (iCn3D) Structure Viewer is not only a web-based 3D viewer, but also a structure analysis tool interactively or in the batch mode using NodeJS scripts based on the npm package icn3d. iCn3D synchronizes the display of 3D structure, 2D interaction, and 1D sequences and annotations. Users' custom displays can be saved in a short URL or a PNG image. The complete package of iCn3D including Three.js and jQuery is in the directory "dist" after you get the source code with the "Code" button. View a 3D structure in iCn3D, input a PDB ID, and click "Load". You can also click the "File" menu to "Open File" or input other IDs. You can open a browser in your Virtual Reality (VR) headset and view a 3D structure in iCn3D. Then click the button "Enter VR" at the bottom center of your browser to enter the VR view. You can select residues with the trigger button.

Features:

• View a 3D structure in iCn3D
• VR and AR views in iCn3D
• The Augmented Reality (AR) view is currently only available to iCn3D views in Chrome browser using Android phones
• You can open a bowser in your Virtual Reality (VR) headset and view a 3D structure in iCn3D
• Python scripts to batch process structures
• Annotations for AlphaFold structures

Programming Language: JavaScript.
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