bpga

We have hosted the application bpga in order to run this application in our online workstations with Wine or directly.

Quick description about bpga:

BPGA is a fast pan-genome analysis tool for microbial genomes. Along with regular pan genome profiles, BPGA also provides detailed statistics and sequences with their downstream analysis like KEGG/COG assignments and phylogeny based on core as well as pan genome. In addition, it also studies genes with extreme/atypical GC contents as that of the genomic GC content, sub-grouping of large datasets etc.

Features:

• Pan-genome Profile
• Gene Family Distribution (Shared and New Genes)
• Phylogeny
• Function and Pathway assignments

Audience: Science/Research.

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